Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATCNGC2; CNGC2; DND1
Type: Protein GRN ID: np42371 Name: ATCNGC2; CNGC2; DND1
Annotation: DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-regulated ion channel family protein [TCDB:2.A.16.2] [TCDB:3.A.18.1]
Gene Locus: AT5G15410
Gene Expression (Affy ATH1 probeset): 246510_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1
3 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6
4 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=1.05154) with  --  SCPL13
5 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.848611) with  --  AT2G46220
6 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.827445) with  --  AT2G27730
7 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.871643) with  --  AT2G15960
8 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.932887) with  --  AT2G15580
9 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.975599) with  --  ATGPX1; GPX1
10 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=1.2157) with  --  AGT; AGT1; SGAT
11 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.957988) with  --  ATMYBL2; MYBL2
12 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.922342) with  --  AT3G03150
13 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.820583) with  --  AT3G15900
14 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.884229) with  --  ATMT3; MT3
15 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.918474) with  --  CRR31
16 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.800439) with  --  AT4G31810
17 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.85897) with  --  AT5G28450
18 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.85897) with  --  LHCA2
19 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.883986) with  --  SIG4; SIGD
20 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has similar expression pattern (mutual information value=0.901104) with  --  ATCYSA; CYSA; FL3-27
21 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has product (in catalytic reaction)  --  Sinapoyl malate
22 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.864809) with  --  SCPL8; SNG1  --  has product (in catalytic reaction)  --  D-Glucose
23 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  regulates the expression of   --  BES1
24 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  is regulated by  --  della family, transcription factor gene
25 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  ATDET1; DET1; FUS2
26 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  pil5
27 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  FBI1; HFR1; REP1; RSF1
28 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  Phytochrome B (PhyB)
29 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  PIF3
30 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  AT4G37710
31 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  ATP8; AtRCD1; CEO; CEO1; RCD1
32 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  Phytochrome A (PhyA)
33 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
34 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=0.985435) with  --  LHB1B1; LHCB1.4
35 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=0.985435) with  --  LHB1B2; LHCB1.5
36 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=0.859617) with  --  ATHPR1; HPR
37 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=0.896028) with  --  LHCB4.2
38 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=1.13047) with  --  AT3G47250
39 ATCNGC2; CNGC2; DND1  --  has similar expression pattern (mutual information value=0.890674) with  --  PIF5; PIL6  --  has similar expression pattern (mutual information value=0.819232) with  --  XTH6
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact