Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G18420
Type: Protein GRN ID: np42354 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2363 (InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G18420
Gene Expression (Affy ATH1 probeset): 250042_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
3 AT5G18420  --  has similar expression pattern (mutual information value=0.920842) with  --  AT5G63010
4 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  interacts with  --  ATRPA32B; RPA32B
5 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  interacts with  --  ATRPA2; ATRPA32A; ROR1; RPA2; RPA32A
6 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.880152) with  --  ATTOM22-I; TOM22-I
7 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.811119) with  --  AT1G09320
8 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=1.01891) with  --  DRT111
9 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.884191) with  --  AT1G07615
10 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.943361) with  --  AT1G48560
11 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.997132) with  --  AT1G12830
12 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.979427) with  --  ftsh10
13 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.816498) with  --  AT1G71350
14 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.804033) with  --  DPMS1
15 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.875195) with  --  AT3G02320
16 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.825304) with  --  AT3G18380
17 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=1.00986) with  --  AT3G19630
18 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.858895) with  --  AT2G34040
19 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.812999) with  --  AT1G56290
20 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.822057) with  --  AT4G10060
21 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.835152) with  --  ACSF; CHL27; CRD1
22 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.936534) with  --  AT3G62920
23 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.855433) with  --  AT3G63400
24 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.804628) with  --  AT5G06780
25 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.877325) with  --  AT5G07360
26 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.958298) with  --  emb1441
27 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.812567) with  --  AT5G49880
28 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.913337) with  --  AT5G51130
29 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.882204) with  --  ATLACS7; LACS7
30 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=1.04852) with  --  AT5G15570
31 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.842713) with  --  AT5G09390
32 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.9013) with  --  AT4G17620
33 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.918185) with  --  AT4G16980
34 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.818944) with  --  AT4G17010
35 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.988999) with  --  FAR1
36 AT5G18420  --  has similar expression pattern (mutual information value=0.850031) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A  --  has similar expression pattern (mutual information value=0.960233) with  --  SMU2
37 AT5G18420  --  has similar expression pattern (mutual information value=0.920842) with  --  AT5G63010  --  has similar expression pattern (mutual information value=0.853656) with  --  AT4G17950
38 AT5G18420  --  has similar expression pattern (mutual information value=0.920842) with  --  AT5G63010  --  has similar expression pattern (mutual information value=0.80721) with  --  AT5G18950
39 AT5G18420  --  has similar expression pattern (mutual information value=0.920842) with  --  AT5G63010  --  has similar expression pattern (mutual information value=0.846591) with  --  AT5G42060
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact