Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AtRAD21.1; SYN2
Type: Protein GRN ID: np42341 Name: AtRAD21.1; SYN2
Annotation: SYN2, AtRAD21.1 | Rad21/Rec8-like family protein
Gene Locus: AT5G40840
Gene Expression (Affy ATH1 probeset): 249326_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19
3 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  interacts with  --  AT4G24310
4 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.831482) with  --  ATGLK1; GLK1; GPRI1
5 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.874713) with  --  AT2G03980
6 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.931546) with  --  ABCG12; AtABCG12; ATWBC12; CER5; D3; WBC12
7 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.858968) with  --  ATEXP5; ATEXPA5; ATHEXP ALPHA 1.4; EXP5; EXPA5
8 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.84182) with  --  ATCLH1; ATHCOR1; CLH1; CORI1
9 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.973526) with  --  AT5G55620
10 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.921761) with  --  tgg2/myrosinase 2
11 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.921761) with  --  tgg1/myrosinase 1
12 AtRAD21.1; SYN2  --  has similar expression pattern (mutual information value=0.81401) with  --  ABCG19; ATWBC19; WBC19  --  has similar expression pattern (mutual information value=0.82222) with  --  AT4G17470
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab