Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATIREG3; IREG3; IREG3; MAR1; RTS3
Type: Protein GRN ID: np42188 Name: ATIREG3; IREG3; IREG3; MAR1; RTS3
Annotation: ATIREG3, MAR1, RTS3, IREG3 | iron-regulated protein 3
Gene Locus: AT5G26820
Gene Expression (Affy ATH1 probeset): 246847_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140
3 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=0.936366) with  --  Carotenoid biosynthesis
4 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.131) with  --  ATAB2
5 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.1333) with  --  PLSP1
6 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.01013) with  --  AT3G18500
7 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.15683) with  --  PAM68
8 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=0.982152) with  --  AT4G29590
9 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.08286) with  --  PGR3
10 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=0.939509) with  --  PEX11B
11 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=0.920908) with  --  AT5G48220
12 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.03684) with  --  AtPLR1; PLR1
13 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.16814) with  --  APO2; emb1629
14 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=0.940733) with  --  AT5G62840
15 ATIREG3; IREG3; IREG3; MAR1; RTS3  --  has similar expression pattern (mutual information value=0.801853) with  --  AT1G05140  --  has similar expression pattern (mutual information value=1.06719) with  --  AT4G36530
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact