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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G43560
Type: Protein GRN ID: np42166 Name:
Annotation: TRAF-like superfamily protein
Gene Locus: AT5G43560
Gene Expression (Affy ATH1 probeset): 249100_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B
3 AT5G43560  --  interacts with  --  AHK3
4 AT5G43560  --  has similar expression pattern (mutual information value=0.855543) with  --  AT5G41940
5 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B  --  interacts with  --  OE23; OEE2; PSBP-1; PSII-P
6 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B  --  interacts with  --  LHCA5
7 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B  --  interacts with  --  TPR4; WSIP2
8 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B  --  interacts with  --  TPR3
9 AT5G43560  --  interacts with  --  AT-HSFB2B; HSFB2B  --  interacts with  --  TPR2
10 AT5G43560  --  interacts with  --  AHK3  --  has similar expression pattern (mutual information value=0.800174) with  --  AT2G35680
11 AT5G43560  --  interacts with  --  AHK3  --  has similar expression pattern (mutual information value=0.887826) with  --  AT1G21780
12 AT5G43560  --  interacts with  --  AHK3  --  is a member of  --  AHK3 family64, response regulator and putative novel transcription factor gene
13 AT5G43560  --  interacts with  --  AHK3  --  is a member of  --  AHK4 family65, response regulator and putative novel transcription factor gene
14 AT5G43560  --  has similar expression pattern (mutual information value=0.855543) with  --  AT5G41940  --  interacts with  --  ATCESA8; CESA8; IRX1; LEW2
15 AT5G43560  --  has similar expression pattern (mutual information value=0.855543) with  --  AT5G41940  --  interacts with  --  AtMAPR5; ATMP1; MSBP1
16 AT5G43560  --  has similar expression pattern (mutual information value=0.855543) with  --  AT5G41940  --  interacts with  --  AT1G15150
17 AT5G43560  --  has similar expression pattern (mutual information value=0.855543) with  --  AT5G41940  --  has similar expression pattern (mutual information value=0.895473) with  --  AT2G17930
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