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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G20550
Type: Protein GRN ID: np41866 Name:
Annotation: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Gene Locus: AT5G20550
Gene Expression (Affy ATH1 probeset): 246093_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G20550  --  has similar expression pattern (mutual information value=0.812664) with  --  GIK
3 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440
4 AT5G20550  --  has similar expression pattern (mutual information value=0.812664) with  --  GIK  --  has similar expression pattern (mutual information value=0.837939) with  --  AT2G02680
5 AT5G20550  --  has similar expression pattern (mutual information value=0.812664) with  --  GIK  --  has similar expression pattern (mutual information value=0.995385) with  --  AT5G53320
6 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  interacts with  --  AT5G60320
7 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  has product (in catalytic reaction)  --  S-Formylglutathione
8 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  has product (in catalytic reaction)  --  Ketone
9 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  has similar expression pattern (mutual information value=1.0088) with  --  ATSPP1; SPP1
10 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  has similar expression pattern (mutual information value=0.932882) with  --  AGL21
11 AT5G20550  --  has similar expression pattern (mutual information value=0.898044) with  --  AT1G22440  --  has similar expression pattern (mutual information value=1.04214) with  --  GAD; GAD1
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