Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node JK218; NPH3; RPT3
Type: Protein GRN ID: np41254 Name: JK218; NPH3; RPT3
Annotation: NPH3, RPT3, JK218 | Phototropic-responsive NPH3 family protein
Gene Locus: AT5G64330
Gene Expression (Affy ATH1 probeset): 247288_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1
3 JK218; NPH3; RPT3  --  interacts with  --  PKS1
4 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  interacts with  --  AT1G72390
5 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.812801) with  --  ABCG32; ATPDR4; PDR4; PEC1
6 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.851155) with  --  AT2G18300
7 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.871448) with  --  AT1G52190
8 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.844) with  --  AT3G16370
9 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.862217) with  --  ABCB2; PGP2
10 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.801162) with  --  AT5G14410
11 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  has similar expression pattern (mutual information value=0.83183) with  --  P1R1
12 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  modify  --  ABCB19/ATMDR1
13 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  modify  --  PKS4
14 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  modify  --  NPL1; PHOT2
15 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  modify  --  AT4G14480
16 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  modify  --  AHA1
17 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  transport  --  Glycerol
18 JK218; NPH3; RPT3  --  interacts with  --  JK224; NPH1; PHOT1; RPT1  --  transport  --  Urea
19 JK218; NPH3; RPT3  --  interacts with  --  PKS1  --  interacts with  --  Phytochrome A (PhyA)
20 JK218; NPH3; RPT3  --  interacts with  --  PKS1  --  interacts with  --  Phytochrome B (PhyB)
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab