Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

	Screen Resolution:
	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT5G59305

Type: Protein	GRN ID: np41158	Name:
Annotation:	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus:	AT5G59305
Gene Expression (Affy ATH1 probeset):	247719_at

Choose color for highlight:

Display edge: validated and predicted
Display node/edge prompt:
Layout:
as format

Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT5G59305 -- is the target gene of -- ath-miR5655
3	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- LOB
4	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- AT5G35965
5	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- NF-YB13
6	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- ATPK10; CIPK15; PKS3; SIP2; SNRK3.1
7	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- AT1G65370
8	AT5G59305 -- is the target gene of -- ath-miR5655 -- inhibit the expression of -- AT1G33350

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab Disclaimer \| Contact