Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G52975
Type: Protein GRN ID: np41057 Name:
Annotation: Protein of unknown function (DUF1278)
Gene Locus: AT5G52975
Gene Expression (Affy ATH1 probeset): 248284_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2
3 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.878063) with  --  AT2G18820
4 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.863049) with  --  AT2G07070
5 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.890771) with  --  AT2G25565
6 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.887588) with  --  AT2G16000
7 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.876391) with  --  INO
8 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.8049) with  --  AT1G35610
9 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.900982) with  --  AT1G15600
10 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.823428) with  --  AT2G35080
11 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.846442) with  --  AT5G28600
12 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.826366) with  --  AT4G03950
13 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.857629) with  --  AT3G46360
14 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.806885) with  --  TMT3
15 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.828156) with  --  AT5G54220
16 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.802812) with  --  AT5G35300
17 AT5G52975  --  has similar expression pattern (mutual information value=0.895488) with  --  LLG2  --  has similar expression pattern (mutual information value=0.860929) with  --  ATPUP3; PUP3
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact