Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node KCS20
Type: Protein GRN ID: np40913 Name: KCS20
Annotation: KCS20 | 3-ketoacyl-CoA synthase 20 [EC:2.3.1.199]
Gene Locus: AT5G43760
Gene Expression (Affy ATH1 probeset): 249123_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 KCS20  --  interacts with  --  AT3G52640
3 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1
4 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4
5 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2
6 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  ATYLMG2; YLMG2
7 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT1G27290
8 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT3G18250
9 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  RUS3
10 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  ATMAPR3; ATMP2; MAPR3; MSBP2
11 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AtMAPR2; MAPR2
12 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  DER1
13 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT4G38690
14 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT4G05370
15 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  ATDHAR1; DHAR1; DHAR5
16 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  ARGOS
17 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  GONST5
18 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT2G31440
19 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT3G15710
20 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT5G42370
21 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  AT5G09310
22 KCS20  --  interacts with  --  AT3G52640  --  interacts with  --  PS1
23 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  interacts with  --  AtRABA1e; RABA1e
24 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  interacts with  --  BTI2; RTNLB2
25 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  interacts with  --  PRA1.F3; PRA8
26 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  interacts with  --  AT1G73920
27 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  interacts with  --  ABC4
28 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  has similar expression pattern (mutual information value=0.926074) with  --  CYP86A8; LCR
29 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  has similar expression pattern (mutual information value=0.826527) with  --  AT3G26450
30 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  has similar expression pattern (mutual information value=0.888726) with  --  AT4G23670
31 KCS20  --  has similar expression pattern (mutual information value=0.957014) with  --  KCS1  --  has similar expression pattern (mutual information value=0.814546) with  --  AT3G49220
32 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  interacts with  --  AT4G27610
33 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  has similar expression pattern (mutual information value=0.847079) with  --  AT3G43720
34 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  has product (in catalytic reaction)  --  1-Acyl-sn-glycerol 3-phosphate
35 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  transport  --  Nickel(2+)
36 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  transport  --  Fe3+
37 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  transport  --  Cu2+
38 KCS20  --  has similar expression pattern (mutual information value=0.919411) with  --  ATGPAT4; GPAT4  --  transport  --  Zinc cation
39 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=0.903088) with  --  ABCG32; ATPDR4; PDR4; PEC1
40 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=1.05366) with  --  CER6; CUT1; G2; KCS6; POP1
41 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=0.810486) with  --  AT1G72180
42 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=1.20855) with  --  AT1G29670
43 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=0.822405) with  --  AT1G29660
44 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=1.20922) with  --  AtGPAT8; GPAT8
45 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=0.978213) with  --  CER2; VC-2; VC2
46 KCS20  --  has similar expression pattern (mutual information value=0.907049) with  --  ATT1; CYP86A2  --  has similar expression pattern (mutual information value=0.841213) with  --  ATPME44; PME44
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact