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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G05800
Type: Protein GRN ID: np40457 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G05800
Gene Expression (Affy ATH1 probeset): 250742_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52
3 AT5G05800  --  is the target gene of  --  ath-miR858b
4 AT5G05800  --  is the target gene of  --  ath-miR858a
5 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  interacts with  --  NIK1
6 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  has similar expression pattern (mutual information value=1.06563) with  --  RPL24A
7 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  has similar expression pattern (mutual information value=1.00177) with  --  AT3G05560
8 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  has similar expression pattern (mutual information value=1.30658) with  --  RPS6; RPS6A
9 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  has similar expression pattern (mutual information value=0.988497) with  --  AT5G03850
10 AT5G05800  --  interacts with  --  RPL10; RPL10A; SAC52  --  has similar expression pattern (mutual information value=1.08254) with  --  ATEBP1; ATG2; EBP1
11 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYB111; MYB111; PFG3
12 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYB123; ATTT2; MYB123; TT2
13 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  AtMYB42; MYB42
14 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  AtMYB83; MYB83
15 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYB12; MYB12; PFG1
16 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  AtMYB104; MYB104
17 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYB63; MYB63
18 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYBL2; MYBL2
19 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  AtMYB20; MYB20
20 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  AtMYB93; MYB93
21 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATCSTF77; CSTF77
22 AT5G05800  --  is the target gene of  --  ath-miR858b  --  inhibit the expression of  --  ATMYB13; ATMYBLFGN; MYB13
23 AT5G05800  --  is the target gene of  --  ath-miR858a  --  inhibit the expression of  --  AtMYB40; MYB40
24 AT5G05800  --  is the target gene of  --  ath-miR858a  --  inhibit the expression of  --  AtMYB6; MYB6
25 AT5G05800  --  is the target gene of  --  ath-miR858a  --  inhibit the expression of  --  ATMYB48; ATMYB48-1; ATMYB48-2; ATMYB48-3; MYB48
26 AT5G05800  --  is the target gene of  --  ath-miR858a  --  inhibit the expression of  --  MYB65
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