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Location:  Home > Details for node AT5G42860
Type: Protein GRN ID: np40451 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G42860
Gene Expression (Affy ATH1 probeset): 249167_at    
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 Protein modification
 Protein-protein interaction
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 Small RNA-target regulation
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170
3 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT3G52070
4 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  RUS3
5 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT1G23300
6 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT3G01360
7 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT2G28315
8 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT2G43420
9 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  AT4G37445
10 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  ATG1; TG1
11 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  ARGOS
12 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  NHL1
13 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  interacts with  --  ATSUC4; ATSUT4; SUC4; SUT4
14 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  has similar expression pattern (mutual information value=0.80528) with  --  AT1G04040
15 AT5G42860  --  has similar expression pattern (mutual information value=0.802577) with  --  AT2G24170  --  has similar expression pattern (mutual information value=0.863996) with  --  NRS/ER; UER1
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