Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G24680
Type: Protein GRN ID: np40148 Name:
Annotation: Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
Gene Locus: AT5G24680
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G24680  --  interacts with  --  AT1G76110
3 AT5G24680  --  interacts with  --  ATCCS; CCS
4 AT5G24680  --  interacts with  --  AT1G76110  --  interacts with  --  AT1G18610
5 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.86569) with  --  AT2G14080
6 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.977339) with  --  APG2; PGA2; TATC; UNE3
7 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.962973) with  --  AT1G12250
8 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.10693) with  --  ATHPR1; HPR
9 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.01326) with  --  AT1G76730
10 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.83218) with  --  ADR2; WRR4
11 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.08392) with  --  AT3G19800
12 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.05875) with  --  AT1G66130
13 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.08398) with  --  ATCNFU3; NFU3
14 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.885108) with  --  ATF2; TRXF2
15 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.05704) with  --  G6PD1
16 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.96361) with  --  ATFRO6; FRO6; FRO6
17 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.96361) with  --  ATFRO7; FRO7
18 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=0.996027) with  --  FTRA2
19 AT5G24680  --  interacts with  --  AT1G76110  --  has similar expression pattern (mutual information value=1.07957) with  --  CSK
20 AT5G24680  --  interacts with  --  ATCCS; CCS  --  interacts with  --  CSD3
21 AT5G24680  --  interacts with  --  ATCCS; CCS  --  interacts with  --  CNX2
22 AT5G24680  --  interacts with  --  ATCCS; CCS  --  interacts with  --  ATGRX4; GRX4
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact