Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node PROPEP4
Type: Protein GRN ID: np39845 Name: PROPEP4
Annotation: PROPEP4 | elicitor peptide 4 precursor
Gene Locus: AT5G09980
Gene Expression (Affy ATH1 probeset): 250455_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1
3 PROPEP4  --  has similar expression pattern (mutual information value=0.902001) with  --  ATMSL9; MSL9
4 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  interacts with  --  IBH1
5 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  interacts with  --  AT4G24840
6 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  interacts with  --  AIF1
7 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=1.18885) with  --  AT2G25980
8 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=0.814168) with  --  AT1G52070
9 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=0.860634) with  --  AT2G20515
10 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=1.3459) with  --  AT1G33750
11 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=0.856564) with  --  BGLU21
12 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=0.856564) with  --  BGLU22
13 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=1.02477) with  --  MEL4; NPY4
14 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=1.09445) with  --  AT3G15240
15 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=1.21545) with  --  AT5G10130
16 PROPEP4  --  has similar expression pattern (mutual information value=0.820216) with  --  ATBS1  --  has similar expression pattern (mutual information value=0.942819) with  --  AT5G35940
17 PROPEP4  --  has similar expression pattern (mutual information value=0.902001) with  --  ATMSL9; MSL9  --  has similar expression pattern (mutual information value=1.14453) with  --  AT3G24240
18 PROPEP4  --  has similar expression pattern (mutual information value=0.902001) with  --  ATMSL9; MSL9  --  transport  --  Chloric acid
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact