Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G66480
Type: Protein GRN ID: np39561 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G66480
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G66480  --  interacts with  --  IRX15-L
3 AT5G66480  --  interacts with  --  AT2G14860
4 AT5G66480  --  interacts with  --  AT3G01660
5 AT5G66480  --  interacts with  --  AT3G50920
6 AT5G66480  --  interacts with  --  AT3G60590
7 AT5G66480  --  interacts with  --  ATBET11; ATBS14A; BET11; BS14A
8 AT5G66480  --  interacts with  --  ATUTR3; UTR3
9 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31
10 AT5G66480  --  interacts with  --  IRX15-L  --  interacts with  --  AT4G26450
11 AT5G66480  --  interacts with  --  AT3G01660  --  interacts with  --  PRA1.F3; PRA8
12 AT5G66480  --  interacts with  --  AT3G01660  --  interacts with  --  AT1G14340
13 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.03525) with  --  ARASP
14 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.16026) with  --  PORC
15 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=0.915727) with  --  AT1G04350
16 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.19127) with  --  AT2G28605
17 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.22771) with  --  AT1G54500
18 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.15252) with  --  PQL1; PQL2
19 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=0.941079) with  --  AT1G68520
20 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.13193) with  --  NDF5
21 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=0.987667) with  --  AT1G28150
22 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.17483) with  --  PQL1; PQL2
23 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.26303) with  --  ATAB2
24 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.28155) with  --  AT3G22210
25 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.03989) with  --  CYP706A6
26 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.03989) with  --  CYP706A5
27 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.19516) with  --  DEG5; DEGP5; HHOA
28 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.15552) with  --  AT4G27700
29 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=0.978249) with  --  ATSSL4; SSL4
30 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.17026) with  --  AT3G56650
31 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.2637) with  --  AT5G38520
32 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.01144) with  --  AT5G52190
33 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.23806) with  --  AT5G52780
34 AT5G66480  --  interacts with  --  AT3G01660  --  has similar expression pattern (mutual information value=1.27518) with  --  AT5G58260
35 AT5G66480  --  interacts with  --  AT3G50920  --  interacts with  --  BTI3; RTNLB4
36 AT5G66480  --  interacts with  --  AT3G50920  --  interacts with  --  AT3G29270
37 AT5G66480  --  interacts with  --  ATBET11; ATBS14A; BET11; BS14A  --  interacts with  --  AT3G16310
38 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  GPT
39 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G62560
40 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATUTR2; UTR2
41 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATFAO3; FAO3
42 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  CYP81D8
43 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATRBOH D
44 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATCESA3
45 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATELP; ATELP1; ATVSR1; BP-80; BP80; BP80-1;1; BP80B; GFS1; VSR1; VSR1;1
46 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ALE2
47 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  FOLK
48 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  PIN5
49 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATBCB; BCB; BCB; SAG14
50 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  FZL
51 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  NRT1.9
52 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATDTX1; DTX1; TX1
53 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ADS2; DS2
54 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT2G01820
55 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATFKBP42; FKBP42; TWD1; UCU2
56 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  NDH18
57 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT4G30845
58 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G15610
59 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G15900
60 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G27770
61 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G76185
62 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  APE1
63 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT2G36330
64 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT4G15620
65 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  TET6
66 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  TET2
67 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G06170
68 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  SEC61 BETA
69 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  SVL4
70 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G74370
71 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT2G29020
72 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  ATPUP17; PUP17
73 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT4G21570
74 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AtVHP2;1; AVP2; AVPL1; VHP2;1; VP2
75 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G53210
76 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AtMGT3; AtMRS2-5; MGT3; MRS2-5
77 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G33100
78 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT2G38330
79 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G33080
80 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G08930
81 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G30080
82 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT4G12950
83 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  EMB2759
84 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT5G07475
85 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT5G05820
86 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AtENODL15; ENODL15
87 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  DAD2
88 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  PDLP8
89 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT3G19100
90 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G64850
91 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AGP16; ATAGP16
92 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  interacts with  --  AT1G47670
93 AT5G66480  --  interacts with  --  ATUTR3; UTR3  --  transport  --  Rubidium cation
94 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  ERS2
95 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  ATCAT6; CAT6
96 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  ABCG10
97 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  PUX1
98 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  CDC48A
99 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  AtPFA-DSP1; PFA-DSP1
100 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  ATSYP23; SYP23
101 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  AT4G26410
102 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  ARD4; ATARD4
103 AT5G66480  --  interacts with  --  ATSED5; ATSYP31; SED5; SYP31  --  interacts with  --  AT3G50910
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact