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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G12940
Type: Protein GRN ID: np39020 Name:
Annotation: Leucine-rich repeat (LRR) family protein
Gene Locus: AT5G12940
Gene Expression (Affy ATH1 probeset): 250277_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090
3 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5
4 AT5G12940  --  has similar expression pattern (mutual information value=0.826008) with  --  LNG1
5 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  interacts with  --  AT1G68160
6 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  interacts with  --  AT1G10820
7 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=1.22452) with  --  AT1G12080
8 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.905978) with  --  ATSFH3; SFH3
9 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.986317) with  --  AtHB23; HB23
10 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.866589) with  --  AtENODL8; ENODL8
11 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.848393) with  --  AT3G12710
12 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.800183) with  --  GASA4
13 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.928422) with  --  AT5G24580
14 AT5G12940  --  has similar expression pattern (mutual information value=0.814172) with  --  AT2G38090  --  has similar expression pattern (mutual information value=0.847371) with  --  AT5G66310
15 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=1.01457) with  --  ACLA-2
16 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=1.07723) with  --  AXR3
17 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.870784) with  --  AT1G65010
18 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.857533) with  --  AT1G06090
19 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.857533) with  --  AT1G06120
20 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.942394) with  --  AT3G16460
21 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.918808) with  --  AFB1
22 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.812946) with  --  AT3G43960
23 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.860533) with  --  ATHB-3; ATHB3; HAT7; HB-3
24 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.879161) with  --  ANNAT2
25 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  has similar expression pattern (mutual information value=0.821785) with  --  AO1; ATAO1
26 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  is the target gene of  --  ath-miR5643b
27 AT5G12940  --  has similar expression pattern (mutual information value=0.862771) with  --  BGAL5  --  is the target gene of  --  ath-miR5643a
28 AT5G12940  --  has similar expression pattern (mutual information value=0.826008) with  --  LNG1  --  has similar expression pattern (mutual information value=0.851641) with  --  ATCRR2; CCR2
29 AT5G12940  --  has similar expression pattern (mutual information value=0.826008) with  --  LNG1  --  has similar expression pattern (mutual information value=1.33498) with  --  ABCB19/ATMDR1
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