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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G12900
Type: Protein GRN ID: np38973 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus: AT5G12900
Gene Expression (Affy ATH1 probeset): 250265_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G12900  --  interacts with  --  AT3G56370
3 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  AT4G20450
4 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  AT5G47530
5 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  ATPPCK1; PPCK1
6 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  CYCA3;3
7 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  RXW8
8 AT5G12900  --  interacts with  --  AT3G56370  --  interacts with  --  AMT1;3; ATAMT1;3
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