Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G48655
Type: Protein GRN ID: np38882 Name:
Annotation: RING/U-box superfamily protein
Gene Locus: AT5G48655
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 248665_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G48655  --  interacts with  --  AT3G13670
3 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2
4 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT4G30010
5 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT4G10140
6 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT5G23400
7 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT1G66650
8 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT2G18240
9 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT4G36970
10 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT3G55050
11 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  SLAH2
12 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  AT4G12980
13 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  RCN1 ATB BETA BETA
14 AT5G48655  --  interacts with  --  AT3G13670  --  interacts with  --  CYP97C1; LUT1
15 AT5G48655  --  interacts with  --  AT3G13670  --  is modified by  --  MPK16
16 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  MOM; MOM; MOM1
17 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  AT1G29630
18 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  DME
19 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  CMT2
20 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  PKDM7D
21 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  ASHH2; CCR1; EFS; LAZ2; SDG8
22 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  AT2G44410
23 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  AT5G04460
24 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  AT3G07200
25 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  AT1G67180
26 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  ATSIZ1
27 AT5G48655  --  interacts with  --  ATSUMO2; SUM2; SUMO 2; SUMO2  --  interacts with  --  TGA1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact