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Location:  Home > Details for node RARE1
Type: Protein GRN ID: np38639 Name: RARE1
Annotation: RARE1 | Pentatricopeptide repeat (PPR) superfamily protein
Gene Locus: AT5G13270
Gene Expression (Affy ATH1 probeset): 250283_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 RARE1  --  interacts with  --  AT3G15000
3 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780
4 RARE1  --  has similar expression pattern (mutual information value=0.82954) with  --  ATECB2; ECB2; VAC1
5 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940
6 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT1G11430
7 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT1G72530
8 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT2G35240
9 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT5G44780
10 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT3G06790
11 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  DAL; DAL1
12 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT4G20020
13 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT3G27960
14 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT5G04840
15 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT4G10840
16 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  HEMG1; PPO1; PPOX
17 RARE1  --  interacts with  --  AT3G15000  --  interacts with  --  AT1G32580
18 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  interacts with  --  ARD4; ATARD4
19 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  has similar expression pattern (mutual information value=0.812953) with  --  AT3G56510
20 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  has similar expression pattern (mutual information value=0.893745) with  --  AT3G61100
21 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  has similar expression pattern (mutual information value=0.897388) with  --  AT3G62970
22 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  has similar expression pattern (mutual information value=0.808787) with  --  UCH1
23 RARE1  --  has similar expression pattern (mutual information value=0.828636) with  --  AT2G03780  --  has similar expression pattern (mutual information value=0.921524) with  --  NRPE7
24 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940  --  has similar expression pattern (mutual information value=0.806127) with  --  ATHB20; HB20
25 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940  --  has similar expression pattern (mutual information value=0.941123) with  --  CRM3; HCF152
26 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940  --  has similar expression pattern (mutual information value=0.83784) with  --  AT3G59840
27 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940  --  has similar expression pattern (mutual information value=0.819963) with  --  PFN3; PRF3
28 RARE1  --  has similar expression pattern (mutual information value=0.844405) with  --  AT5G39940  --  has similar expression pattern (mutual information value=0.945381) with  --  AT5G08400
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