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Location:  Home > Details for node AT5G55140
Type: Protein GRN ID: np38636 Name:
Annotation: ribosomal protein L30 family protein
Gene Locus: AT5G55140
Gene Expression (Affy ATH1 probeset): 248102_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870
3 AT5G55140  --  has similar expression pattern (mutual information value=0.858245) with  --  AT1G51730
4 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  interacts with  --  NTRC
5 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.822578) with  --  RPS14
6 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.07732) with  --  AT2G27775
7 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.42596) with  --  EDA27; NOP10
8 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.883343) with  --  AT2G31410
9 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.92841) with  --  emb1129
10 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.12236) with  --  AT1G26740
11 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.9092) with  --  AT1G80620
12 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.819522) with  --  EMB2811; RFC2
13 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.984773) with  --  AT1G20430
14 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.857458) with  --  AT3G02220
15 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.912976) with  --  AT3G06790
16 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.897943) with  --  AT3G25545
17 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.17837) with  --  AT1G22270
18 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.902261) with  --  AT4G20020
19 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.926161) with  --  AT4G27380
20 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.814557) with  --  AT4G28200
21 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.88874) with  --  AT4G39300
22 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.21661) with  --  AT3G51010
23 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.951599) with  --  RRP41
24 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=1.19447) with  --  AT5G06360
25 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.949694) with  --  AT5G11630
26 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.970716) with  --  AT5G18790
27 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.970716) with  --  AT3G06320
28 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.891074) with  --  AT5G15750
29 AT5G55140  --  has similar expression pattern (mutual information value=0.964176) with  --  AT1G02870  --  has similar expression pattern (mutual information value=0.969745) with  --  AT5G20160
30 AT5G55140  --  has similar expression pattern (mutual information value=0.858245) with  --  AT1G51730  --  has similar expression pattern (mutual information value=0.83018) with  --  AT3G01740
31 AT5G55140  --  has similar expression pattern (mutual information value=0.858245) with  --  AT1G51730  --  has similar expression pattern (mutual information value=0.921255) with  --  AT5G12190
32 AT5G55140  --  has similar expression pattern (mutual information value=0.858245) with  --  AT1G51730  --  has similar expression pattern (mutual information value=0.846343) with  --  DIM1A
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