Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node CNX5; SIR1
Type: Protein GRN ID: np38633 Name: CNX5; SIR1
Annotation: CNX5, SIR1 | co-factor for nitrate, reductase and xanthine dehydrogenase 5
Gene Locus: AT5G55130
Gene Expression (Affy ATH1 probeset): 248108_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510
3 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.840536) with  --  AT1G20430
4 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.860503) with  --  AT3G01740
5 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.872595) with  --  ATUBC11; UBC11
6 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.822944) with  --  AT3G25545
7 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.896119) with  --  AT1G54850
8 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.838086) with  --  PUX1
9 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.830694) with  --  AT3G51610
10 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.85502) with  --  emb2735
11 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.897557) with  --  AT5G38650
12 CNX5; SIR1  --  has similar expression pattern (mutual information value=0.87168) with  --  AT5G51510  --  has similar expression pattern (mutual information value=0.836029) with  --  AT5G27210
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab