Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G46030
Type: Protein GRN ID: np38204 Name:
Annotation: unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF701, zinc-binding putative (InterPro:IPR007808); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene Locus: AT5G46030
Gene Expression (Affy ATH1 probeset): 248884_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G46030  --  interacts with  --  IBR3
3 AT5G46030  --  is the target gene of  --  ath-miR838
4 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190
5 AT5G46030  --  interacts with  --  IBR3  --  has product (in catalytic reaction)  --  Reduced electron-transferring flavoprotein
6 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  TAF4; TAF4B
7 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT5G40340
8 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT5G28350
9 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  emb1211
10 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT5G20110
11 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT5G07400
12 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  ATCLC-E; CLC-E; CLCE
13 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AKT2
14 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT3G42836
15 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  ARP5; ATARP5
16 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AtERF73; ERF73; HRE1
17 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT1G67040
18 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT1G51630
19 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT1G35390
20 AT5G46030  --  is the target gene of  --  ath-miR838  --  inhibit the expression of  --  AT1G09730
21 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  interacts with  --  RGA1
22 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  interacts with  --  NACA5
23 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  interacts with  --  ATBZIP24; BZIP24
24 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  has similar expression pattern (mutual information value=0.83904) with  --  AT3G01740
25 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  has similar expression pattern (mutual information value=0.921255) with  --  AT1G51730
26 AT5G46030  --  has similar expression pattern (mutual information value=0.851954) with  --  AT5G12190  --  has similar expression pattern (mutual information value=0.934604) with  --  AT4G21110
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact