Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

	Screen Resolution:
	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node LTI65; RD29B

Type: Protein	GRN ID: np37340	Name: LTI65; RD29B
Annotation:	RD29B, LTI65 \| CAP160 protein
Gene Locus:	AT5G52300
Gene Expression (Affy ATH1 probeset):	248352_at

Choose color for highlight:

Display edge: validated and predicted
Display node/edge prompt:
Layout:
as format

Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	LTI65; RD29B -- is regulated by -- CBF1
3	LTI65; RD29B -- is regulated by -- CBF1 -- regulates the expression of -- ATGA2OX2
4	LTI65; RD29B -- is regulated by -- CBF1 -- regulates the expression of -- della family, transcription factor gene
5	LTI65; RD29B -- is regulated by -- CBF1 -- is regulated by -- ATMYB15; ATY19; MYB15
6	LTI65; RD29B -- is regulated by -- CBF1 -- interacts with -- ADA2A; ATADA2A; HAC10; HXA02; HXA2
7	LTI65; RD29B -- is regulated by -- CBF1 -- is a member of -- Family86, transcription factor gene
8	LTI65; RD29B -- is regulated by -- CBF1 -- is a member of -- CBF, transcription factor gene

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab Disclaimer \| Contact