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Location:  Home > Details for node AT5G54100
Type: Protein GRN ID: np37189 Name:
Annotation: SPFH/Band 7/PHB domain-containing membrane-associated protein family [TCDB:3.D.1.6]
Gene Locus: AT5G54100
Gene Expression (Affy ATH1 probeset): 253890_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200
3 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.91556) with  --  AT1G65700
4 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.834679) with  --  AT2G43780
5 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.898863) with  --  HCC1
6 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=1.16423) with  --  ATCOX17; COX17
7 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.909132) with  --  AT3G12340
8 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.968498) with  --  AT4G01990
9 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=1.04877) with  --  AT4G27585
10 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.944111) with  --  AT3G49890
11 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.971084) with  --  AT5G61880
12 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  has similar expression pattern (mutual information value=0.89737) with  --  AT4G37090
13 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  interacts with  --  AT1G14340
14 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  interacts with  --  PRA1.F3; PRA8
15 AT5G54100  --  has similar expression pattern (mutual information value=1.04877) with  --  AT5G55200  --  interacts with  --  APFI; GAMMA CA2
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