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Location:  Home > Details for node AT5G54040
Type: Protein GRN ID: np37084 Name:
Annotation: Cysteine/Histidine-rich C1 domain family protein
Gene Locus: AT5G54040
Transcription factor /
transcriptional regulator:		 chromatin regulator family PHD
Gene Expression (Affy ATH1 probeset): 248183_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960
3 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190
4 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT1G27290
5 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT2G32380
6 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  RUS3
7 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATRAB-A2C; ATRAB11A; ATRABA2C; RAB-A2C; RABA2c
8 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AtRABH1c; RABH1c
9 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATMAPR3; ATMP2; MAPR3; MSBP2
10 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AtMAPR2; MAPR2
11 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT2G43420
12 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT4G38690
13 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATBCA1; ATSABP3; CA1; SABP3
14 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5
15 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATGSTU19; GST8; GSTU19
16 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  NHL1
17 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  PRA1.E
18 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT2G26730
19 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  CLI1; RPK2; TOAD2
20 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT5G63930
21 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  BIR1
22 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ATPLC2; PLC2
23 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT5G48740
24 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT5G10290
25 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT2G37050
26 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  ARAC6; ATRAC6; ATROP5; RAC2; RAC6; ROP5
27 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  AT5G62710
28 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  interacts with  --  FRK1
29 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=0.87107) with  --  AT2G44380
30 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=0.933422) with  --  AT2G21020
31 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=0.933422) with  --  NIP3;1
32 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=1.02863) with  --  ATWRKY65; WRKY65
33 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=0.886403) with  --  AT2G43610
34 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  has similar expression pattern (mutual information value=1.07358) with  --  AT5G43520
35 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  transport  --  Protein-cysteine
36 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  transport  --  Bile salt
37 AT5G54040  --  has similar expression pattern (mutual information value=0.841825) with  --  AT2G28960  --  transport  --  HCO3-
38 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.933066) with  --  AT2G46740
39 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.881327) with  --  UGT71C1
40 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.927425) with  --  UCC1
41 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.27947) with  --  AT2G21045
42 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.814274) with  --  AT1G09740
43 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.941572) with  --  ATRBOHB; ATRBOHB-BETA; RBOHB
44 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.12642) with  --  AT2G04800
45 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.989107) with  --  AR411; ATWRKY14; WRKY14
46 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.07283) with  --  ATFUT6; FUT6
47 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.870782) with  --  scpl3
48 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.868503) with  --  AT1G02360
49 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.25269) with  --  ATMLP-300B; MEE36; MLP-300B
50 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.24517) with  --  ATHB20; HB20
51 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.05782) with  --  AT3G05920
52 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.99802) with  --  AT3G23190
53 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.04117) with  --  ZFP6
54 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.01129) with  --  AT4G02090
55 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.998567) with  --  ENDO5
56 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.01595) with  --  AGP13
57 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.95402) with  --  AT4G28890
58 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.4621) with  --  AT4G30170
59 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.895288) with  --  AT4G31100
60 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.865772) with  --  AT3G47210
61 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.13908) with  --  AT3G59370
62 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.878951) with  --  NIC3
63 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.906439) with  --  AT5G38550
64 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.906439) with  --  AT5G38540
65 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.11316) with  --  DUR
66 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.808221) with  --  ATSBT4.12; SBT4.12
67 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.995761) with  --  AT5G59930
68 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.07297) with  --  ATFLS5; FLS5
69 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.03493) with  --  UGT72E2
70 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=1.02638) with  --  AT4G15400
71 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.870371) with  --  ATMAP70-5; MAP70-5
72 AT5G54040  --  has similar expression pattern (mutual information value=0.817951) with  --  AT3G01190  --  has similar expression pattern (mutual information value=0.96623) with  --  AT4G17800
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