Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT5G27440

Type: Protein	GRN ID: np36160	Name:
Annotation:	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene Locus:	AT5G27440
Gene Expression (Affy ATH1 probeset):	246769_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT5G27440 -- is the target gene of -- ath-miR2933b
3	AT5G27440 -- is the target gene of -- ath-miR2933a
4	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- CPuORF41
5	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- CPuORF42
6	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- CPuORF43
7	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- AT5G09460
8	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- AT4G32390
9	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- AT2G25520
10	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- ATERDJ2A
11	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- AT1G72180
12	AT5G27440 -- is the target gene of -- ath-miR2933b -- inhibit the expression of -- AT1G58235

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