Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT5G01960
Type: Protein GRN ID: np36103 Name:
Annotation: RING/U-box superfamily protein [TCDB:3.D.1.1] [TCDB:3.D.1.2] [TCDB:3.D.1.3] [TCDB:3.D.1.5] [TCDB:3.D.1.6] [TCDB:3.D.9.1]
Gene Locus: AT5G01960
Transcription factor /
transcriptional regulator:		 transcription factor family C2H2
Gene Expression (Affy ATH1 probeset): 251033_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT5G01960  --  interacts with  --  AT2G16030
3 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5
4 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G07650
5 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ETR1
6 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATRBOH D
7 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATELP; ATELP1; ATVSR1; BP-80; BP80; BP80-1;1; BP80B; GFS1; VSR1; VSR1;1
8 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AMT1;1; ATAMT1; ATAMT1;1
9 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATPRK2A; PRK2A
10 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  BAM2
11 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATMEMB12; MEMB12
12 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  PIP1;3; PIP1C; TMP-B
13 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  BIR1
14 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ALMT1; ATALMT1
15 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATHLECRK; HLECRK; LECRK1
16 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ERL1
17 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CBRLK1; RKS2; SD1-13
18 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CRK19
19 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATKC1; AtLKT1; KAT3; KC1
20 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  NIP2;1; NLM4
21 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATPLC9; PLC9
22 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  GSO1
23 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AtIPCS2
24 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ATMLO6; MLO6
25 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G26900
26 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT3G53810
27 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G29180
28 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G41610
29 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G33250
30 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G21237
31 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT4G20390
32 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G34470
33 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G50740
34 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  TET2
35 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AtSWEET9; SWEET9
36 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CRK31
37 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT4G29450
38 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G37050
39 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT5G59670
40 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CRK37
41 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G11330
42 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT5G59700
43 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G26730
44 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G67510
45 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G49230
46 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT4G32600
47 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT4G30660
48 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  PDE321; YSL5
49 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT3G08600
50 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT3G05150
51 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G47530
52 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT5G52050
53 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G15150
54 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G33080
55 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G64820
56 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT5G49130
57 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT3G08930
58 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G35710
59 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G01970
60 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  DER2.2
61 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CYP708A3
62 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  CYP706A1
63 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  PDLP8
64 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT2G01680
65 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT1G05640
66 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  AT5G55330
67 AT5G01960  --  interacts with  --  AT2G16030  --  interacts with  --  ABCG16
68 AT5G01960  --  interacts with  --  AT2G16030  --  has similar expression pattern (mutual information value=0.806895) with  --  AT3G49150
69 AT5G01960  --  interacts with  --  AT2G16030  --  has similar expression pattern (mutual information value=0.827279) with  --  AT5G54350
70 AT5G01960  --  interacts with  --  AT2G16030  --  has similar expression pattern (mutual information value=0.802413) with  --  AT5G54220
71 AT5G01960  --  interacts with  --  AT2G16030  --  has similar expression pattern (mutual information value=0.811464) with  --  AtMYB103; ATMYB80; MS188; MYB103; MYB80
72 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G31790
73 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  CYP707A2
74 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AtRLP30; RLP30
75 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  ATPPT2; PPT2
76 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  ATCESA2; ATH-A; CESA2
77 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  ATFAO3; FAO3
78 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  GLT1; PGLCT
79 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT3G52640
80 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  APE1
81 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G52550
82 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G15900
83 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G19130
84 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G40640
85 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT4G16444
86 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G15610
87 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G33490
88 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G41820
89 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT3G46370
90 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G61570
91 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G28960
92 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT3G59780
93 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT3G59090
94 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G40670
95 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT3G16180
96 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT4G31340
97 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G11450
98 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  ATCHX27; CHX27
99 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G23093
100 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  ALF5
101 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G71140
102 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT1G33100
103 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G28315
104 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT2G42390
105 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G47530
106 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  AT5G41800
107 AT5G01960  --  interacts with  --  ATDHAR1; DHAR1; DHAR5  --  interacts with  --  UGT74E2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact