Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATPTB2; PTB2
Type: Protein GRN ID: np36102 Name: ATPTB2; PTB2
Annotation: ATPTB2, PTB2 | polypyrimidine tract-binding protein 2 [TCDB:1.A.1.4] [TCDB:1.A.4.6] [TCDB:1.A.4.7] [TCDB:8.A.28.1]
Gene Locus: AT5G53180
Gene Expression (Affy ATH1 probeset): 248304_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATPTB2; PTB2  --  interacts with  --  AT1G01630
3 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT1G30860
4 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT4G15730
5 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT4G32190
6 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT5G22310
7 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  ATMAP70-1; MAP70-1
8 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  ATPUB14; PUB14
9 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT3G11590
10 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT2G25650
11 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT4G21570
12 ATPTB2; PTB2  --  interacts with  --  AT1G01630  --  interacts with  --  AT2G23790
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact