Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G30260
Type: Protein GRN ID: np34598 Name:
Annotation: Integral membrane Yip1 family protein
Gene Locus: AT4G30260
Gene Expression (Affy ATH1 probeset): 266949_s_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G30260  --  interacts with  --  ATVHA-C1; AVA-P1; VHA-C1
3 AT4G30260  --  interacts with  --  AT5G27490
4 AT4G30260  --  interacts with  --  AT3G05280
5 AT4G30260  --  interacts with  --  AT1G09330
6 AT4G30260  --  interacts with  --  ATVHA-C1; AVA-P1; VHA-C1  --  interacts with  --  AT4G32750
7 AT4G30260  --  interacts with  --  AT5G27490  --  interacts with  --  AT4G37445
8 AT4G30260  --  interacts with  --  AT5G27490  --  interacts with  --  AT5G42200
9 AT4G30260  --  interacts with  --  AT5G27490  --  interacts with  --  PIP1;3; PIP1C; TMP-B
10 AT4G30260  --  interacts with  --  AT3G05280  --  interacts with  --  BTI3; RTNLB4
11 AT4G30260  --  interacts with  --  AT1G09330  --  interacts with  --  BTI2; RTNLB2
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab