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Location:  Home > Details for node AT4G24440
Type: Protein GRN ID: np34014 Name:
Annotation: transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)
Gene Locus: AT4G24440
Gene Expression (Affy ATH1 probeset): 254162_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G24440  --  interacts with  --  AT1G07480
3 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510
4 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3
5 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920
6 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.861283) with  --  SMP1
7 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.866843) with  --  AT1G09320
8 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.971484) with  --  AT1G65220
9 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.88433) with  --  AtBRCC36A; BRCC36A
10 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.88433) with  --  AtBRCC36B; BRCC36B
11 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.811711) with  --  AT1G01930
12 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.86389) with  --  AT3G03420
13 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.816606) with  --  ATCHIP; CHIP
14 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.940411) with  --  AtMYB4R1; MYB4R1
15 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.900631) with  --  AT4G18260
16 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.863897) with  --  AT3G48120
17 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.8122) with  --  AT5G01350
18 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.834392) with  --  AT5G06780
19 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.872516) with  --  AT5G47090
20 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  has similar expression pattern (mutual information value=0.85542) with  --  AT5G49400
21 AT4G24440  --  has similar expression pattern (mutual information value=0.818236) with  --  AT3G05510  --  is the target gene of  --  ath-miR868-3p
22 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3  --  has similar expression pattern (mutual information value=0.819681) with  --  VHA-A
23 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3  --  has similar expression pattern (mutual information value=1.10775) with  --  PMP
24 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3  --  has similar expression pattern (mutual information value=0.813954) with  --  EMB2752
25 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3  --  transport  --  Sugar phosphate
26 AT4G24440  --  has similar expression pattern (mutual information value=0.897422) with  --  VHA-A3  --  transport  --  Aromatic acid
27 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.934371) with  --  ATHAP3; ATNF-YB1; HAP3; HAP3A; NF-YB1
28 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.936534) with  --  ATRPA1A; ATRPA70A; RPA1A; RPA70A
29 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.91507) with  --  ATTOM22-I; TOM22-I
30 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.815802) with  --  AT2G24830
31 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.894854) with  --  ATDSS1(I); DSS1(I)
32 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.931193) with  --  AT1G12830
33 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.811297) with  --  DPMS1
34 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.805185) with  --  AtPFA-DSP3; PFA-DSP3
35 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.919971) with  --  ATCESA2; ATH-A; CESA2
36 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.868762) with  --  ACSF; CHL27; CRD1
37 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.836742) with  --  AT3G60750
38 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.861451) with  --  CCH/CHLH/GUN5
39 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.848435) with  --  ATGSL1; GLN2; GS2
40 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.92916) with  --  AT5G30490
41 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.814103) with  --  AT5G09390
42 AT4G24440  --  has similar expression pattern (mutual information value=0.891052) with  --  AT3G62920  --  has similar expression pattern (mutual information value=0.970378) with  --  AT4G16980
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