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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G39860
Type: Protein GRN ID: np33777 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Gene Locus: AT4G39860
Gene Expression (Affy ATH1 probeset): 252821_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G39860  --  has similar expression pattern (mutual information value=0.951255) with  --  AT2G46140
3 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860
4 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655
5 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1
6 AT4G39860  --  has similar expression pattern (mutual information value=0.810874) with  --  PLP3a
7 AT4G39860  --  has similar expression pattern (mutual information value=0.910403) with  --  ATDI21; DI21
8 AT4G39860  --  has similar expression pattern (mutual information value=0.951255) with  --  AT2G46140  --  has similar expression pattern (mutual information value=0.826709) with  --  AT3G15900
9 AT4G39860  --  has similar expression pattern (mutual information value=0.951255) with  --  AT2G46140  --  has similar expression pattern (mutual information value=0.802715) with  --  AT1G20810
10 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  UNE12
11 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  LSU1
12 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  AT4G22250
13 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  PTF1; TCP13; TFPD
14 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  ATMYB84; MYB84; RAX3
15 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  MEE18
16 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  AtTCP15; TCP15
17 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  interacts with  --  ACD31.2; ACD32.1
18 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.913449) with  --  AT2G25510
19 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.917581) with  --  AT2G22680
20 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=1.2023) with  --  AT1G02475
21 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.809172) with  --  AT1G74640
22 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=1.16584) with  --  TAPX
23 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=1.08116) with  --  PSAH-1
24 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=1.1784) with  --  PIFI
25 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.976373) with  --  AT1G31550
26 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.918895) with  --  ACHT2
27 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.8398) with  --  AT5G24210
28 AT4G39860  --  has similar expression pattern (mutual information value=0.894433) with  --  AT2G24860  --  has similar expression pattern (mutual information value=0.844583) with  --  ACD1; LLS1; PAO
29 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.08501) with  --  AT1G65250
30 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.08501) with  --  AT1G65190
31 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.25988) with  --  PQL1; PQL2
32 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=0.804609) with  --  PGM
33 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.07514) with  --  AT1G49750
34 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.34497) with  --  ATLFNR2; FNR2
35 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.27186) with  --  AT1G75460
36 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.00455) with  --  AT1G68520
37 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.40116) with  --  AT1G76450
38 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.47145) with  --  AT3G23700
39 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.03037) with  --  AT1G16880
40 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=0.923131) with  --  FTRA1
41 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.58066) with  --  AT5G53490
42 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.35691) with  --  FTRA2
43 AT4G39860  --  has similar expression pattern (mutual information value=0.833038) with  --  AT1G73655  --  has similar expression pattern (mutual information value=1.26827) with  --  AT2G26500
44 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.01694) with  --  FTSH2; VAR2
45 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.13159) with  --  AT2G35260
46 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.944726) with  --  AT2G29290
47 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.04256) with  --  PSAE-2
48 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.12283) with  --  ATGPX1; GPX1
49 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.10494) with  --  PTAC4; VIPP1
50 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.05222) with  --  PSBR
51 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.03003) with  --  PSAD-2
52 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.20559) with  --  NDH-O
53 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.06046) with  --  PETE1
54 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.43632) with  --  ATHPR1; HPR
55 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.832657) with  --  AT4G00780
56 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.06436) with  --  PSAD-1
57 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.12867) with  --  PETC; PGR1
58 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.885795) with  --  AT4G19530
59 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.864774) with  --  AT4G23885
60 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.01286) with  --  AT5G02160
61 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.890146) with  --  SIG4; SIGD
62 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.06007) with  --  CLB4; CSB3; GCPE; HDS; ISPG
63 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=1.09895) with  --  XTH6
64 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.824051) with  --  tgg2/myrosinase 2
65 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.824051) with  --  tgg1/myrosinase 1
66 AT4G39860  --  has similar expression pattern (mutual information value=0.833017) with  --  CHUP1  --  has similar expression pattern (mutual information value=0.885506) with  --  AT4G15545
67 AT4G39860  --  has similar expression pattern (mutual information value=0.810874) with  --  PLP3a  --  interacts with  --  RAP2.7; TOE1
68 AT4G39860  --  has similar expression pattern (mutual information value=0.910403) with  --  ATDI21; DI21  --  has similar expression pattern (mutual information value=0.815458) with  --  NACA3
69 AT4G39860  --  has similar expression pattern (mutual information value=0.910403) with  --  ATDI21; DI21  --  interacts with  --  AHL29; SOB3
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