Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G25830
Type: Protein GRN ID: np33299 Name:
Annotation: Uncharacterised protein family (UPF0497)
Gene Locus: AT4G25830
Gene Expression (Affy ATH1 probeset): 254041_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1
3 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1
4 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370
5 AT4G25830  --  has similar expression pattern (mutual information value=1.07106) with  --  CER2; VC-2; VC2
6 AT4G25830  --  has similar expression pattern (mutual information value=0.867353) with  --  ATPRP4; PRP4
7 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720
8 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=1.01593) with  --  FDH; KCS10
9 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.825763) with  --  AT1G33811
10 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.937429) with  --  ABCG12; AtABCG12; ATWBC12; CER5; D3; WBC12
11 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.854739) with  --  AT1G29670
12 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.903088) with  --  ATT1; CYP86A2
13 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=1.2572) with  --  ABCB2; PGP2
14 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.812801) with  --  JK224; NPH1; PHOT1; RPT1
15 AT4G25830  --  has similar expression pattern (mutual information value=0.895602) with  --  ABCG32; ATPDR4; PDR4; PEC1  --  has similar expression pattern (mutual information value=0.91091) with  --  AT5G45950
16 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1  --  has similar expression pattern (mutual information value=0.993157) with  --  ATPRP2; PRP2
17 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1  --  has similar expression pattern (mutual information value=1.0842) with  --  EDA17; HTH
18 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1  --  has similar expression pattern (mutual information value=1.10582) with  --  AT4G18970
19 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1  --  has similar expression pattern (mutual information value=0.905565) with  --  AT1G35170
20 AT4G25830  --  has similar expression pattern (mutual information value=0.905165) with  --  BDG1; CED1  --  has similar expression pattern (mutual information value=0.905565) with  --  AT1G35180
21 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.873955) with  --  AT1G75900
22 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.803357) with  --  MLP28
23 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.851385) with  --  MUB5
24 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.932083) with  --  CER6; CUT1; G2; KCS6; POP1
25 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=1.03485) with  --  AT1G55260
26 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=1.0804) with  --  AtGPAT8; GPAT8
27 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.859778) with  --  AT4G29020
28 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=1.07505) with  --  ATPME44; PME44
29 AT4G25830  --  has similar expression pattern (mutual information value=0.90957) with  --  AT3G16370  --  has similar expression pattern (mutual information value=0.8649) with  --  AT5G63180
30 AT4G25830  --  has similar expression pattern (mutual information value=1.07106) with  --  CER2; VC-2; VC2  --  has similar expression pattern (mutual information value=0.840572) with  --  CYP86A8; LCR
31 AT4G25830  --  has similar expression pattern (mutual information value=0.867353) with  --  ATPRP4; PRP4  --  interacts with  --  AT5G28900
32 AT4G25830  --  has similar expression pattern (mutual information value=0.867353) with  --  ATPRP4; PRP4  --  has similar expression pattern (mutual information value=1.03977) with  --  AT1G09310
33 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720  --  has similar expression pattern (mutual information value=0.801719) with  --  TBL45
34 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720  --  has similar expression pattern (mutual information value=0.975924) with  --  AT2G04570
35 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720  --  has similar expression pattern (mutual information value=0.847079) with  --  ATGPAT4; GPAT4
36 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720  --  has similar expression pattern (mutual information value=0.830367) with  --  AT5G13400
37 AT4G25830  --  has similar expression pattern (mutual information value=0.899901) with  --  AT3G43720  --  has similar expression pattern (mutual information value=0.914327) with  --  HHP1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact