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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G01400
Type: Protein GRN ID: np32902 Name:
Annotation: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has 26268 Blast hits to 8959 proteins in 289 species: Archae - 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants - 25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink).
Gene Locus: AT4G01400
Gene Expression (Affy ATH1 probeset): 255573_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12
3 AT4G01400  --  has similar expression pattern (mutual information value=0.80591) with  --  ATPERK1; PERK1
4 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  CBL8
5 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  CBL7
6 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  CBL6; SCABP2
7 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  CBL5
8 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  ATCBL3; CBL3
9 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  ATCBL2; CBL2
10 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  AtMYB70; MYB70
11 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  ATCBL1
12 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  AT4G39050
13 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  AT5G22310
14 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  BP; BP1; KNAT1
15 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  AT1G05410
16 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  ATEXO70E2; EXO70E2
17 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  BRX
18 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  PYRR; UPP
19 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  CBL9
20 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  AT5G58720
21 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  IAA11
22 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  MEE18
23 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  RLK4
24 AT4G01400  --  interacts with  --  CIPK9; PKS6; SnRK3.12  --  interacts with  --  ATSOS3; CBL4; SOS3
25 AT4G01400  --  has similar expression pattern (mutual information value=0.80591) with  --  ATPERK1; PERK1  --  has similar expression pattern (mutual information value=0.887961) with  --  AT3G23750
26 AT4G01400  --  has similar expression pattern (mutual information value=0.80591) with  --  ATPERK1; PERK1  --  has similar expression pattern (mutual information value=0.800303) with  --  AT3G27960
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