Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G28830
Type: Protein GRN ID: np32830 Name:
Annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Gene Locus: AT4G28830
Gene Expression (Affy ATH1 probeset): 253762_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2
3 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  Phytochrome A (PhyA)
4 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  ATCLC-C; CLC-C
5 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  ATEXO70H1; EXO70H1
6 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  AT3G03000
7 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  AT5G13810
8 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  NRPB6B; NRPE6B
9 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  AT3G28715
10 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  ATPP7; PP7
11 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  interacts with  --  Phytochrome B (PhyB)
12 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.972479) with  --  AT2G25830
13 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.843965) with  --  CPN60B; LEN1
14 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.907681) with  --  GLYR2; GR2
15 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.90106) with  --  CYP20-3; ROC4
16 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.844184) with  --  AT5G55220
17 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.927247) with  --  AT5G66470
18 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has similar expression pattern (mutual information value=0.909335) with  --  AT5G19370
19 AT4G28830  --  interacts with  --  ATNDPK2; NDPK IA; NDPK IA IA; NDPK1A; NDPK2  --  has product (in catalytic reaction)  --  Nucleoside triphosphate
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact