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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ckl3
Type: Protein GRN ID: np32777 Name: ckl3
Annotation: ckl3 | casein kinase I-like 3
Gene Locus: AT4G28880
Gene Expression (Affy ATH1 probeset): 253764_s_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ckl3  --  interacts with  --  ATCCT2; CCT2
3 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1
4 ckl3  --  interacts with  --  ACBP5
5 ckl3  --  interacts with  --  AT1G35430
6 ckl3  --  has similar expression pattern (mutual information value=0.851692) with  --  SBI1
7 ckl3  --  interacts with  --  ATCCT2; CCT2  --  has product (in catalytic reaction)  --  CDP-choline
8 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  interacts with  --  CIB5
9 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  interacts with  --  SPA1
10 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  interacts with  --  CIB1
11 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  interacts with  --  COP1
12 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  interacts with  --  Phytochrome B (PhyB)
13 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  has similar expression pattern (mutual information value=0.829748) with  --  AT2G46550
14 ckl3  --  interacts with  --  AT-PHH1; ATCRY2; CRY2; FHA; PHH1  --  has similar expression pattern (mutual information value=0.835214) with  --  AtTLP9
15 ckl3  --  interacts with  --  ACBP5  --  interacts with  --  AT3G61790
16 ckl3  --  interacts with  --  AT1G35430  --  interacts with  --  AT3G29270
17 ckl3  --  interacts with  --  AT1G35430  --  interacts with  --  PRA1.B5
18 ckl3  --  has similar expression pattern (mutual information value=0.851692) with  --  SBI1  --  has similar expression pattern (mutual information value=0.838466) with  --  ACK2; ICK7; KRP4; KRP4
19 ckl3  --  has similar expression pattern (mutual information value=0.851692) with  --  SBI1  --  has similar expression pattern (mutual information value=0.84096) with  --  KNAT5
20 ckl3  --  has similar expression pattern (mutual information value=0.851692) with  --  SBI1  --  has similar expression pattern (mutual information value=0.896133) with  --  AT3G51110
21 ckl3  --  has similar expression pattern (mutual information value=0.851692) with  --  SBI1  --  has similar expression pattern (mutual information value=0.830198) with  --  ATSNX1; SNX1
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