Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G22820
Type: Protein GRN ID: np31069 Name:
Annotation: A20/AN1-like zinc finger family protein
Gene Locus: AT4G22820
Transcription factor /
transcriptional regulator:		 putative novel transcription regulator family A20-like
Gene Expression (Affy ATH1 probeset): 254276_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140
3 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  interacts with  --  AT5G58720
4 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  interacts with  --  AT1G35210
5 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.999201) with  --  AT2G42220
6 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.804043) with  --  AT2G38410
7 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.908115) with  --  AGT3
8 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.822944) with  --  At-SR30; ATSRP30; ATSRP30.1; ATSRP30.2; SR30
9 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.975108) with  --  Aty2; ty2
10 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.930476) with  --  AT1G74730
11 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.909505) with  --  PYM
12 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.976566) with  --  ARI5; ATARI5
13 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.932506) with  --  GAPA-2
14 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.957814) with  --  AT1G44000
15 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=1.12326) with  --  AtMTM1; MTM1
16 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.924328) with  --  ARFB1C; ATARFB1C
17 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.815295) with  --  AT3G09770
18 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.858373) with  --  AT3G24740
19 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.940468) with  --  ORF02; PHT2;1
20 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=1.05586) with  --  ASIL2
21 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.933808) with  --  AtTic62; Tic62
22 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.928597) with  --  GDC1; LTD
23 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.966416) with  --  AT4G01150
24 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.952084) with  --  AT4G12060
25 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=1.02835) with  --  CH-42; CH42; CHL11; CHLI-1; CHLI1
26 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.934611) with  --  ACP4
27 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=1.01646) with  --  ACBP2
28 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.897349) with  --  AT3G48880
29 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.820376) with  --  AtPPa6; PPa6
30 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.992228) with  --  AT5G63640
31 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  has similar expression pattern (mutual information value=0.835757) with  --  AT5G24870
32 AT4G22820  --  has similar expression pattern (mutual information value=0.875266) with  --  AT1G68140  --  is the target gene of  --  ath-miR447c-3p
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact