Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G24780
Type: Protein GRN ID: np31057 Name:
Annotation: Pectin lyase-like superfamily protein
Gene Locus: AT4G24780
Gene Expression (Affy ATH1 probeset): 254119_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD
3 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190
4 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD  --  interacts with  --  ACX1
5 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD  --  interacts with  --  AT2G30140
6 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD  --  interacts with  --  AT4G24730
7 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD  --  interacts with  --  PRXR1
8 AT4G24780  --  interacts with  --  AtHsp90-7; AtHsp90.7; HSP90.7; SHD  --  interacts with  --  CVP1; FRL1; SMT2
9 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  AT1G16170
10 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  AT1G14990
11 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  AT1G14020
12 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  HOS3-1
13 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  CYP98A3
14 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  ATC4H; C4H; CYP73A5; REF3
15 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  ATGUT1; GUT2; IRX10
16 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  interacts with  --  TGA1
17 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  has similar expression pattern (mutual information value=0.920816) with  --  AtENODL15; ENODL15
18 AT4G24780  --  has similar expression pattern (mutual information value=0.805992) with  --  AT3G53190  --  has similar expression pattern (mutual information value=1.02549) with  --  AT4G15830
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact