Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT4G17250
Type: Protein GRN ID: np30842 Name:
Annotation: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT4G17250
Gene Expression (Affy ATH1 probeset): 245272_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT4G17250  --  interacts with  --  AT1G73660
3 AT4G17250  --  interacts with  --  AT1G73660  --  interacts with  --  EMB40; FASS; FASS 2; FS1; GDO; TON2
4 AT4G17250  --  interacts with  --  AT1G73660  --  interacts with  --  LHCA3
5 AT4G17250  --  interacts with  --  AT1G73660  --  interacts with  --  AT4G08850
6 AT4G17250  --  interacts with  --  AT1G73660  --  interacts with  --  UBP18
7 AT4G17250  --  interacts with  --  AT1G73660  --  interacts with  --  UGT72E1
8 AT4G17250  --  interacts with  --  AT1G73660  --  is the target gene of  --  ath-miR842
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact