Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT3G28760

Type: Protein	GRN ID: np29951	Name:
Annotation:	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 390 Blast hits to 390 proteins in 131 species: Archae - 144; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
Gene Locus:	AT3G28760
Gene Expression (Affy ATH1 probeset):	256585_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT3G28760 -- has similar expression pattern (mutual information value=0.831137) with -- AHB2; ARATH GLB2; ATGLB2; GLB2; HB2; NSHB2
3	AT3G28760 -- has similar expression pattern (mutual information value=0.831137) with -- AHB2; ARATH GLB2; ATGLB2; GLB2; HB2; NSHB2 -- has similar expression pattern (mutual information value=0.819098) with -- AT3G04550
4	AT3G28760 -- has similar expression pattern (mutual information value=0.831137) with -- AHB2; ARATH GLB2; ATGLB2; GLB2; HB2; NSHB2 -- has similar expression pattern (mutual information value=0.876358) with -- AT4G39040
5	AT3G28760 -- has similar expression pattern (mutual information value=0.831137) with -- AHB2; ARATH GLB2; ATGLB2; GLB2; HB2; NSHB2 -- has similar expression pattern (mutual information value=0.820536) with -- CRR7

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