Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G54470
Type: Protein GRN ID: np29724 Name:
Annotation: uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) [EC:2.4.2.10] [EC:4.1.1.23]
Gene Locus: AT3G54470
Gene Expression (Affy ATH1 probeset):
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G54470  --  has product (in catalytic reaction)  --  UMP
3 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate
4 AT3G54470  --  has product (in catalytic reaction)  --  Orotate
5 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  has product (in catalytic reaction)  --  dCDP
6 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  has product (in catalytic reaction)  --  Uracil
7 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  Orotidine 5'-phosphate
8 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  AT3G57220
9 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  UDP-N-acetyl-alpha-D-glucosamine
10 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  GPT
11 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  ATUK/UPRT1; UK/UPRT1; UKL1
12 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  Uridine
13 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  UKL4
14 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  UKL5
15 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  UKL2
16 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is product (in catalytic reaction) of  --  UKL3
17 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  ATWAKL10; WAKL10
18 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  TEL2
19 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G55930
20 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G33290
21 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  EMB2733; ESP3
22 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G24030
23 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G15850
24 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  CP24; LHCB6
25 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  SLAC1 CDI3
26 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G06870
27 AT3G54470  --  has product (in catalytic reaction)  --  UMP  --  is transported by  --  AT1G03670
28 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  has product (in catalytic reaction)  --  Nicotinate D-ribonucleotide
29 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  AT2G44530
30 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  D-Ribose 5-phosphate
31 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  PRS2
32 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  QPT
33 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  pat1; TRP1
34 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  ATATP-PRT1; ATP-PRT1; HISN1A
35 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  1-(5-Phospho-D-ribosyl)-ATP
36 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  ATATP-PRT2; ATP-PRT2; HISN1B
37 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  ASE3; ATASE3
38 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  5-Phosphoribosylamine
39 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  ASE2; ATASE2; ATPURF2; CIA1
40 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  ASE1; ATASE; ATASE1
41 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  PYRR; UPP
42 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  HGPT
43 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  IMP
44 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  APT5
45 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  APT3
46 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  APT4
47 AT3G54470  --  has product (in catalytic reaction)  --  5-Phospho-alpha-D-ribose 1-diphosphate  --  is product (in catalytic reaction) of  --  APT1
48 AT3G54470  --  has product (in catalytic reaction)  --  Orotate  --  is product (in catalytic reaction) of  --  PYRD
49 AT3G54470  --  has product (in catalytic reaction)  --  Orotate  --  is product (in catalytic reaction) of  --  p-Benzoquinone
50 AT3G54470  --  has product (in catalytic reaction)  --  Orotate  --  is product (in catalytic reaction) of  --  (S)-Dihydroorotate
51 AT3G54470  --  has product (in catalytic reaction)  --  Orotate  --  is transported by  --  AT1G55200
52 AT3G54470  --  has product (in catalytic reaction)  --  Orotate  --  is transported by  --  AT1G01830
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact