Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATRPABC24.3; NRPB5; NRPD5; RPB5A
Type: Protein GRN ID: np28136 Name: ATRPABC24.3; NRPB5; NRPD5; RPB5A
Annotation: ATRPABC24.3, RPB5A, NRPB5, NRPD5 | Eukaryotic rpb5 RNA polymerase subunit family protein
Gene Locus: AT3G22320
Gene Expression (Affy ATH1 probeset): 258453_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3
3 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  regulates the expression of   --  ABI5
4 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  regulates the expression of   --  ABF1 family47, transcription factor gene
5 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  regulates the expression of   --  SDH2-3
6 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  is regulated by  --  AtWRKY2
7 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  pil5
8 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  AIP2
9 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  APRR1; AtTOC1; PRR1; TOC1
10 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  CO; FG
11 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  CCH/CHLH/GUN5
12 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  ATSYP23; SYP23
13 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  ATBZIP10; BZO2H1
14 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  ATBZIP25; BZIP25; BZO2H4
15 ATRPABC24.3; NRPB5; NRPD5; RPB5A  --  interacts with  --  ABI3  --  interacts with  --  ABI4
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact