Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node ATROPGEF6; ROPGEF6
Type: Protein GRN ID: np27989 Name: ATROPGEF6; ROPGEF6
Annotation: ATROPGEF6, ROPGEF6 | ROP (rho of plants) guanine nucleotide exchange factor 6
Gene Locus: AT3G55660
Gene Expression (Affy ATH1 probeset): 251778_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b
3 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643a
4 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT5G31702
5 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT4G06700
6 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT3G57720
7 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT3G20640
8 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT2G47870
9 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT2G10600
10 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT2G08986
11 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT2G07981
12 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AGL94
13 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  BGAL5
14 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT1G40104
15 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT1G38870
16 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT1G38790
17 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT1G37035
18 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  AT1G24270
19 ATROPGEF6; ROPGEF6  --  is the target gene of  --  ath-miR5643b  --  inhibit the expression of  --  HAP5C; NF-YC9
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation


Copyright © The Zhao Lab