Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT3G18790

Type: Protein	GRN ID: np27674	Name:
Annotation:	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink).
Gene Locus:	AT3G18790
Gene Expression (Affy ATH1 probeset):	257803_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

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Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT3G18790 -- is the target gene of -- ath-miR5650
3	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT5G62910
4	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT5G49140
5	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT5G30470
6	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- BOI; RING
7	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- LOI1; MEF11
8	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT3G21985
9	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- CSY3
10	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- CPUORF7
11	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- ATXYL1; AXY3; TRG1; XYL1
12	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT1G66880
13	AT3G18790 -- is the target gene of -- ath-miR5650 -- inhibit the expression of -- AT1G10300

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