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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G53540
Type: Protein GRN ID: np26898 Name:
Annotation: unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 1710 Blast hits to 868 proteins in 206 species: Archae - 2; Bacteria - 409; Metazoa - 304; Fungi - 204; Plants - 304; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink).
Gene Locus: AT3G53540
Gene Expression (Affy ATH1 probeset): 251946_at    
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G53540  --  interacts with  --  ATMAP70-2; MAP70-2
3 AT3G53540  --  interacts with  --  ATMAP70-2; MAP70-2  --  interacts with  --  AT4G32190
4 AT3G53540  --  interacts with  --  ATMAP70-2; MAP70-2  --  interacts with  --  ATMAP70-5; MAP70-5
5 AT3G53540  --  interacts with  --  ATMAP70-2; MAP70-2  --  interacts with  --  AT2G32650
6 AT3G53540  --  interacts with  --  ATMAP70-2; MAP70-2  --  interacts with  --  AT1G20770
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