Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G47120
Type: Protein GRN ID: np26821 Name:
Annotation: RNA recognition motif (RRM)-containing protein [TCDB:9.B.24.1]
Gene Locus: AT3G47120
Transcription factor /
transcriptional regulator:		 transcription factor family C3H
Gene Expression (Affy ATH1 probeset): 252453_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G47120  --  interacts with  --  AT1G31870
3 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  NAPRT2
4 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  AT4G39050
5 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  ATEXO70E2; EXO70E2
6 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  AT3G11590
7 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  AT1G30860
8 AT3G47120  --  interacts with  --  AT1G31870  --  interacts with  --  RCN1 ATB BETA BETA
9 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.00848) with  --  AT2G44200
10 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.950775) with  --  AT2G02570
11 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.848214) with  --  AT2G38420
12 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.917236) with  --  AT2G16860
13 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.970306) with  --  ATCSN2; COP12; CSN2; FUS12
14 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.17959) with  --  ATIPT2
15 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.22896) with  --  AT1G60900
16 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.22896) with  --  AT1G60830
17 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.980332) with  --  SMP1
18 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.926719) with  --  DRP3B
19 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.802837) with  --  CRWN2; LINC2
20 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.982843) with  --  MBD10
21 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.02474) with  --  AT1G15200
22 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.03142) with  --  AT1G32630
23 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.901741) with  --  AT1G01930
24 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.04326) with  --  ftsh10
25 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.969889) with  --  NF-YC10
26 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.822204) with  --  AT2G47410
27 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.808089) with  --  ASHH1; ASHH1; SDG26
28 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.957695) with  --  AT3G09360
29 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.14971) with  --  CHR11
30 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.09223) with  --  HAT3.1
31 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.03524) with  --  EIF4B1
32 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.03283) with  --  AT4G39160
33 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.02706) with  --  AT3G48120
34 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.904719) with  --  AT3G53390
35 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.925366) with  --  ATFIP37; FIP37
36 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.17447) with  --  ATGSTT2; GST10B; GSTT2
37 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.17447) with  --  ATGSTT3; GST10C; GSTT3
38 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.17202) with  --  AT5G53800
39 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=1.00797) with  --  AT5G55670
40 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.86922) with  --  CPL4
41 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.930098) with  --  ELF9
42 AT3G47120  --  interacts with  --  AT1G31870  --  has similar expression pattern (mutual information value=0.981344) with  --  SMP2
43 AT3G47120  --  interacts with  --  AT1G31870  --  is modified by  --  AGC2; AGC2-1; AtOXI1; OXI1
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact