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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G55240
Type: Protein GRN ID: np26741 Name:
Annotation: Plant protein 1589 of unknown function
Gene Locus: AT3G55240
Gene Expression (Affy ATH1 probeset):
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 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B
3 AT3G55240  --  interacts with  --  AT4G30780
4 AT3G55240  --  interacts with  --  AtRHD6; RHD6
5 AT3G55240  --  interacts with  --  AT3G07500
6 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.19088) with  --  CJD1
7 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.987378) with  --  AT2G17240
8 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.15923) with  --  AT1G14030
9 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.831644) with  --  AT1G17100
10 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.911153) with  --  PDE318
11 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.925636) with  --  emb2768
12 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.15165) with  --  AT3G20230
13 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.913461) with  --  AT3G27180
14 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.11055) with  --  BSM
15 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.02954) with  --  AT4G20960
16 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.09409) with  --  AT4G26370
17 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.18483) with  --  AT3G51140
18 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.2552) with  --  AT3G52150
19 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.01049) with  --  APG3
20 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.14734) with  --  AtcpRRF; cpRRF; HFP108; RRF
21 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.40546) with  --  AT5G11450
22 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.99785) with  --  DEG8; DEGP8
23 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.999898) with  --  EMB3144
24 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=0.960456) with  --  AT5G17560
25 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has similar expression pattern (mutual information value=1.34543) with  --  PHR2
26 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has product (in catalytic reaction)  --  Methionyl peptide
27 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  has product (in catalytic reaction)  --  Formate
28 AT3G55240  --  interacts with  --  ATDEF2; DEF2; PDF1B  --  interacts with  --  PKP-ALPHA; PKP1
29 AT3G55240  --  interacts with  --  AT4G30780  --  interacts with  --  ATVAMP714; VAMP714; VAMP714
30 AT3G55240  --  interacts with  --  AtRHD6; RHD6  --  interacts with  --  AT3G01435
31 AT3G55240  --  interacts with  --  AtRHD6; RHD6  --  interacts with  --  HLH1; PAR1
32 AT3G55240  --  interacts with  --  AtRHD6; RHD6  --  interacts with  --  CBL9
33 AT3G55240  --  interacts with  --  AtRHD6; RHD6  --  interacts with  --  AT3G27420
34 AT3G55240  --  interacts with  --  AT3G07500  --  interacts with  --  AT5G02050
35 AT3G55240  --  interacts with  --  AT3G07500  --  interacts with  --  EMB139; EMB506
36 AT3G55240  --  interacts with  --  AT3G07500  --  interacts with  --  AT1G60420
37 AT3G55240  --  interacts with  --  AT3G07500  --  interacts with  --  AT2G24550
38 AT3G55240  --  interacts with  --  AT3G07500  --  interacts with  --  SGD9; SUVH5
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