Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AtNUP1; NUP1

Type: Protein	GRN ID: np26720	Name: AtNUP1; NUP1
Annotation:	BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
Gene Locus:	AT3G10650
Gene Expression (Affy ATH1 probeset):	258946_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1
3	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- AtSAC3B; SAC3B
4	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- ATAMPD; FAC1
5	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- AT5G61290
6	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- UCH1
7	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- ATDSS1(V); DSS1(V)
8	AtNUP1; NUP1 -- interacts with -- AtTHP1; EER5; ESSP1 -- interacts with -- AtSAC3A; SAC3A

	Funding by the National Science Foundation	Funding by the Oklahoma Center for the Advancement of Science & Technology	Additional funding by the Samuel Roberts Noble Foundation

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