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A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G52480
Type: Protein GRN ID: np26283 Name:
Annotation: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene Locus: AT3G52480
Gene Expression (Affy ATH1 probeset): 252057_at    
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 Protein modification
 Protein-protein interaction
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 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
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 Carrier and transported molecule
 Catalytic chemical reaction
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Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2
3 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711
4 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  interacts with  --  ASK13; SK13
5 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.841762) with  --  AT2G35050
6 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.811903) with  --  AT1G52140
7 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.897333) with  --  AT1G49500
8 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.81424) with  --  GAMMA-TIP2; SITIP; TIP1;2; TIP2
9 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.921367) with  --  AT5G05750
10 AT3G52480  --  has similar expression pattern (mutual information value=0.862691) with  --  AtTLP2; TLP2  --  has similar expression pattern (mutual information value=0.868873) with  --  AHK2
11 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  interacts with  --  ATMLO4; MLO4
12 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  interacts with  --  ATCNGC13; CNGC13
13 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  interacts with  --  ATGDU2; GDU2
14 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  interacts with  --  AT4G18220
15 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  has similar expression pattern (mutual information value=0.824219) with  --  AT3G01520
16 AT3G52480  --  has similar expression pattern (mutual information value=0.897039) with  --  ATVAMP711; VAMP711  --  has similar expression pattern (mutual information value=0.916257) with  --  AT5G01800
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