Screen Resolution:     
Welcome to HRGRN
A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks   
Location:  Home > Details for node AT3G07010
Type: Protein GRN ID: np26248 Name:
Annotation: Pectin lyase-like superfamily protein
Gene Locus: AT3G07010
Gene Expression (Affy ATH1 probeset): 258552_at    
Graph Customization
   
Choose color for highlight:  
Display edge: validated and predicted
Display node/edge prompt:
Layout:
 as format     
Data Filter
 Protein modification
 Protein-protein interaction
        also include predicted relationship
 Compound-protein interaction
 TF-target gene regulation
 Small RNA-target regulation
        also include predicted relationship
 Carrier and transported molecule
 Catalytic chemical reaction
 Co-expressed gene pair
        with mutual information value >

  Ignore nodes having > relationships
 
Relationship type:  protein modification     catalytic chemical reaction     protein-protein interaction    
compound-protein interaction     TF-target gene regulation     small RNA-target regulation    
co-expressed gene pair     carrier and transported molecule     family/complex and member
Relationship evidence:  Solid line: validated          Dashed line: predicted
Relationship direction: Arrow: positive          T shape: negative          None arrow: unknown or n/a
Hormone association: Thicker line: hormone related relationship         : hormone related Node
Node type:  Transcription factor or transcriptional regulator       Compound       Kinase
 Small regulatory RNA (miRNA & ta-siRNA)       Other nodes
No. Path
2 AT3G07010  --  has similar expression pattern (mutual information value=0.877864) with  --  DRT100
3 AT3G07010  --  has similar expression pattern (mutual information value=0.815802) with  --  AT5G48900
4 AT3G07010  --  has similar expression pattern (mutual information value=0.877864) with  --  DRT100  --  has similar expression pattern (mutual information value=0.953842) with  --  XTH8
5 AT3G07010  --  has similar expression pattern (mutual information value=0.877864) with  --  DRT100  --  has similar expression pattern (mutual information value=1.03937) with  --  AT3G12710
6 AT3G07010  --  has similar expression pattern (mutual information value=0.877864) with  --  DRT100  --  has similar expression pattern (mutual information value=0.861408) with  --  GASA4
7 AT3G07010  --  has similar expression pattern (mutual information value=0.877864) with  --  DRT100  --  has similar expression pattern (mutual information value=0.921616) with  --  IQD19
8 AT3G07010  --  has similar expression pattern (mutual information value=0.815802) with  --  AT5G48900  --  has similar expression pattern (mutual information value=0.832497) with  --  AtENODL8; ENODL8
9 AT3G07010  --  has similar expression pattern (mutual information value=0.815802) with  --  AT5G48900  --  has similar expression pattern (mutual information value=1.01933) with  --  ATEXP11; ATEXPA11; ATHEXP ALPHA 1.14; EXP11; EXPA11
   Funding by the National Science Foundation    Funding by the Oklahoma Center for the Advancement of Science & Technology    Additional funding by the Samuel Roberts Noble Foundation

Copyright © The Zhao Lab

Disclaimer | Contact