Welcome to HRGRN: A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

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	Welcome to HRGRN A Graph Search-Empowered Integrative Database of Arabidopsis Signaling Transduction, Metabolism and Gene Regulation Networks

Location: Home > Details for node AT3G04820

Type: Protein	GRN ID: np25961	Name:
Annotation:	Pseudouridine synthase family protein [EC:5.4.99.27]
Gene Locus:	AT3G04820
Gene Expression (Affy ATH1 probeset):	259082_at

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Protein modification

Protein-protein interaction
also include predicted relationship

Compound-protein interaction

TF-target gene regulation

Small RNA-target regulation
also include predicted relationship

Carrier and transported molecule

Catalytic chemical reaction

Co-expressed gene pair
with mutual information value >

Ignore nodes having > relationships

Relationship type:	protein modification catalytic chemical reaction protein-protein interaction compound-protein interaction TF-target gene regulation small RNA-target regulation co-expressed gene pair carrier and transported molecule family/complex and member
Relationship evidence:	Solid line: validated Dashed line: predicted
Relationship direction:	Arrow: positive T shape: negative None arrow: unknown or n/a
Hormone association:	Thicker line: hormone related relationship : hormone related Node
Node type:	Transcription factor or transcriptional regulator Compound Kinase Small regulatory RNA (miRNA & ta-siRNA) Other nodes

No.	Path
2	AT3G04820 -- is the target gene of -- ath-miR3434-5p
3	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- CHR4; PKR1
4	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- PLDALPHA3
5	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- AT4G24710
6	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- AT3G23870
7	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- AT2G19870
8	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- AT2G14510
9	AT3G04820 -- is the target gene of -- ath-miR3434-5p -- inhibit the expression of -- AT2G14440

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